The Origin
Fermented foods have been known to mankind since the dawn of times. Historical evidence has revealed the fact that the fermentation of different foods and their consumption existed across many civilizations. Excavations from the Natufian burial sites have uncovered the historical data about beer brewing. The Natufian culture which is believed to have existed between 12500BC-9500BC in Palestine and Southern Syria during the Mesolithic age, consisted of sedentary or semi-sedentary population (meaning people living in one place for a lengthy period). Similar evidence gathered from the stone tools in the region of Mozambique dating back to the Mesolithic age, has revealed the existence of the practice of grain processing especially wild sorghum thus giving a clue to the possibility of beer brewing.
As man discovered and adopted to new ways of living in the Neolithic or New stone age, evidence provided more clarity about the fermentation practices. In China, unearthing of the pottery vessels and their chemical analysis has brought into light that the concept of fermentation existed around 7000 BC. The fermentation was purposely done on foods such as rice, honey and fruits. Evidence also indicates that alcoholic beverages were made from fermented cereals.
Looking into the other clues, the Mesopotamian civilization needs a special mention. The region of Mesopotamia holds a distinct place in history due to its rich cultural heritage. It is referred as the ‘cradle of ancient civilization’, as this region was the point of origin to a myriad of world’s oldest civilizations. The Mesopotamian civilization that was centered in the region of Iraq saw the convention of making fermented foods and beverages as early as 7500BC. Foods such as milk, meat, fruits and vegetables were used for fermentation. The presence of tartaric acid and grape juice residue from old jars reveal that the tradition of wine making prevailed in this region roughly around 5000BC.It is said that the fermentation of the malt of cereals and brewing happened in the later part of the Neolithic period. According to the available data, it is presumed to have coincided with the discovery of pottery though there are possible hints that this could have emerged much earlier.
The advancement to Chalcolithic and Bronze ages saw improvements in the fermentation skills. Archeological evidence from various sites in Egypt have pointed to the existence of beer brewing and bread making dating back to 2000BC. The Bronze age was also marked by the cultivation of grapes. In addition to these, the tradition of fermentation was seen across many ancient cultures including Babylonian (beer brewing), East Asian (soy sauce), Middle East and Europe (yogurt) and Greece (fruit fermentation). Interestingly in Greek mythology, Dionysus is the ancient Greek God related to grape-harvest, wine making, orchards, fruit and vegetation and hence considered as the God of fruit fermentation. With the practice of fermentation passed down to several generations, many of these ancient foods have successfully made their voyage across centuries into the current world.
The ancient objective
In accordance with the historical time line, fermentation is said to have co-existed during the Neolithic or New Stone Age period. This prehistoric period which was marked by significant cultural and technological advancements, saw the evolution of agriculture, domestication of animals and establishment of permanent settlements. The seasonal changes encountered during the cultivation of crops witnessed variation in the availability of food from ample amounts to times of acute shortage. On the other hand, rearing of animals such as sheep, goat and cattle became an important source for meat and milk. In order to overcome food shortage during unfavorable seasons and enhance the storage life of perishable foods like meat and milk, the practice of fermentation came into existence. The tradition of cheese making also prevailed during this period. In addition to the extended shelf life, fermented foods were an important source of nourishment during the periods of food scarcity. Also, the process of fermentation was applied conventionally to improve the taste of foods and they also formed an integral part of traditional medicine and ceremonies. However, the importance of microorganisms and the health benefits of fermented foods were unknown.
Emerging microbes
The link between man, microbes and food has been established since the times man began to explore the ways to modify the foods for the better. The evidence to the use of microbes for fermentation across ages comes from the molecular and chemical examination of the remnants obtained from the vessels excavated from the Neolithic sites of China, Mesopotamia and Egypt. It is said that the driving force behind the fermentation process was the use of yeast. It is most likely that the process of fermentation could have been initiated by yeast present in nature as in fermented fruits and through insects like bees and drosophila (this insect feeds on the yeast contained in overripe fruits). But there is no clarity as to when specific types of yeasts were used for making bread, wine and beer. The yeast Saccharomyces cerevisiae that is naturally present in fruits such as grapes and dates, cereals such as wheat and barley and the guts of bees and wasps, has expanded genetically into many strains in continuum with human activity across centuries. There is also some affirmation to the domestication of earliest strains related to the production of rice wine and grapes. Despite being known as the microbe of antiquity, the knowledge about its existence and role in fermentation was unknown.
In the several centuries that followed the pre historic period, the breakthrough discovery of Antoni Van Leeuwenhoek in the year 1670s gave new insights into the world of microbes. He was the first scientist to bring into light the existence of microorganisms including bacteria and yeasts. Even though the bacteria were seen as pathogens in the initial phases of discovery, their potential benefits to human health were recognized later. However, their role in fermentation was unknown till mid 1850s when Louis Pasteur discovered fermentation. Interestingly his groundbreaking work on fermentation was done on the request of a beetroot-based alcohol manufacturer from Lille-agricultural industrial region who was facing problems with the production. The discovery of the fungus Aspergillus oryzae by the German scientist Korschelt in 1878 was followed by recognition of numerous microbes and starter cultures.
The 1800s also saw the recognition of the bacteria Lactobacillus acidophilus which marked the beginning of a new era to the world of probiotics. Initially called as Bacillus acidophilus (which means fond of acids), they were first isolated in the year 1890 by Dr. Ernst Moro. They were found in the intestinal tract of humans and animals and were also found in the feces of infants fed on milk as well as adults who were consuming a diet containing excessive milk and lactose. In the year 1899, bifidobacteria were discovered by Henry Tissier which were isolated from the stools of breast-fed infants. Both these bacteria gained recognition for their health benefits.
The development of starter cultures provided new insights into not only improving the quality of fermented foods, but also expanded their scope for commercialization. These are basically microbial preparations consisting of single or mixed microbes which when added to foods aid fermentation in a controlled manner. The microbes in question are bacteria, yeast and fungus. The discovery of fermentation by Pasteur provided a novel beginning for starter cultures. The very first pure culture of lactic acid bacteria (LAB) was isolated by Joseph Lister in 1873. Later the Russian scientist Elie Metchnikoff proposed the beneficial effects of LAB on human health. In the year 1919, Orla Jensen identified seven groups of lactic acid bacteria. Among these only Streptococcus remains in the picture today. Currently Lactic acid bacteria comprises of 16 groups among which 12 are linked with food. The attempt to genetically modify some of these bacteria in 1982 proved to be an important milestone in improving their characteristics to enhance the quality of fermented foods. With continuing genetic research, a new method involving gene editing was developed in 2013. Since this falls under the category of genetically modified organisms (GMO), scientists are still working towards its approval in food industry. Some of the classes of microbes that are used as starter cultures are listed below
Lactic acid bacteria (LAB): Lactobacillus, Leuconostoc, Enterococcus, Streptococcus, Oenococcus, Pediococcus.
Non-LAB bacteria: Micrococcaceae, Bifidobacterium, Propionibacterium, Brachybacterium.
Yeast and molds: Debaryomyces, Kluyveromyces, Saccharomyces, Aspergillus, Mucor, Penicillium, Rhizopus.
Science explained
Zymology or the science behind the concept of fermentation was not known until Pasteur’s discovery in 1857. His proposed theory of microbial role and his innovative work on alcoholic and lactic acid fermentation brought into light about the chemical reactions involved in the process. The interpretation of fermentation depends on the perspective it is looked upon. The simple definition of fermentation is ‘a series of chemical changes brought about in the food or beverage as a result of microbial action'. From the chemical standpoint it is ‘a process in which substrates are transformed into alcohols, carbon dioxide and organic acids anaerobically (absence of oxygen)’. The substrate or the raw material in question can be either solids or liquids. Some examples of the liquid substrates are fruit juices or byproducts like molasses which contain natural sugars. On the other hand, the use of solid substrates containing low moisture like cereal grains, legume seeds, rice and wheat bran etc. is called solid-substrate fermentation. Finally, the meaning of fermentation in food production generally refers to the beneficial changes brought about in the food or drink as a result of microbial action. The four fundamental types of fermentation based on the biochemical pathways are
Alcoholic or ethanol fermentation: This is a chemical process mostly involving yeast (Saccharomyces cerevisiae) and to a lesser extent bacteria (Zymomonas mobilis). Here sugar is converted into ethyl alcohol and carbon dioxide. The first step in this fermentation is the breakdown of glucose by yeast to give rise to pyruvate molecules. These are converted into acetaldehyde during which more carbon dioxide is released. In the final step, acetaldehyde gets converted to ethanol. As the name indicates, this fermentation is used to produce bread, beer and wine.
Lactic acid fermentation: In this fermentation, the chemical process involves Lactic acid bacteria (LAB) wherein the sugars are converted into lactic acid or lactate. The lactic acid bacteria can be grouped into homo, hetero and facultative fermenters depending on the end product. In homofermentaion only lactate is produced whereas in heterofermentation ethanol and carbon dioxide are produced along with lactate. Facultative fermenters follow either homo or heterofermentation based on the availability of substrate and environmental conditions. This fermentation is mainly used to produce yogurt, kimchi and fermented cereals.
Acetic acid fermentation: The chemical process involves bacteria that belong to Acetobacter group. Here the alcohol and sugars present in the substrate are converted into acetic acid. This type of fermentation is used in the production of vinegar, acidic beer, cocoa, water kefir and kombucha. In the above mentioned types of fermentation, the organic acids that are produced prevent the growth of harmful bacteria in addition to enhancing the quality of fermented foods.
Alkali fermentation: The chemical process involves the bacteria that come under Bacillus and coagulase-negative Staphylococcus group. Here the proteins that are present in the substrate are converted into amino acids, peptides and ammonia. The ammonia released during fermentation rises the PH value of food thus making it alkaline. This prevents the spoilage of food. Also, ammonia is responsible for imparting umami flavor to the food (along with sweet, sour, bitter, salty tastes, umami is considered to be a fifth taste and is regarded as a pleasant savory taste). Foods such as Japanese natto and African fermented legumes and eggs are produced by this method.
Alkali fermentation: The chemical process involves the bacteria that come under Bacillus and coagulase-negative Staphylococcus group. Here the proteins that are present in the substrate are converted into amino acids, peptides and ammonia. The ammonia released during fermentation rises the PH value of food thus making it alkaline. This prevents the spoilage of food. Also, ammonia is responsible for imparting umami flavor to the food (along with sweet, sour, bitter, salty tastes, umami is considered to be a fifth taste and is regarded as a pleasant savory taste). Foods such as Japanese natto and African fermented legumes and eggs are produced by this method.
Alcoholic fermentation: Saccharomyces cerevisiae (yeast), Zymomonas mobilis (bacteria).
Lactic acid fermentation: Lactic acid bacteria (LAB).
Homofermentive LAB: Lactococcus lactis, Streptococcus thermophilus, Lactobacillus acidophilus, Lactobacillus helviticus, Lactobacillus delbrueckii, Pediococcus and Enterococcus genera.
Heterofermentative LAB: Leuconostoc species, Fructilactobacillus sanfranciscensis, Levilactobacillus brevis, Limosilactobacillus fermentum, Limosilactobacillus reuteri.
Facultative LAB: Lactiplantibacillus plantarum, Lacticaseibacillus casei, Latilactobacillus curvatum.
Acetic acid fermentation: Acetobacter species.
Alkali fermentation: Bacteria belonging to Bacillus and coagulase-negative staphylococcus group.
Techniques uncovered
From the ancient past: Traveling back to the Paleolithic times, it is speculated that our predecessors consumed foods that underwent natural fermentation. Despite having no scientific knowledge, with passage of time man acknowledged the unique qualities of fermented food in terms of preservation, taste and also the effects the fermented foods had on the body and mind. According to the historical evidence, intentional fermentation seems to have commenced in the Neolithic times and coincided with the evolution of agriculture. The probable use of the naturally occurring yeast evolved into domestication of the same in the centuries that followed. These techniques were used for brewing of alcoholic beverages involving cereals.
With the development of grape cultivation, the fermentation of grape juice was initiated by mixing it with figs. Also, the pulp of other fruits such as jujubes and carobs were collected and after the addition of figs and water, they were kept in special vessels for controlled fermentation. Probably the figs aided the initiation of fermentation process due to the presence of yeast in the deposited pollen, transmitted by insects, such as wasps. The spontaneous fermentation took place as a result of the contact of yeast with the fruit pulp. However, fermentation depended on the presence of ample amounts of sugar in the fruit pulp.
In quest for a more controlled method of fermentation, honey gained recognition as it contained yeast in addition to adequate sugar. This method of fermentation gained popularity in the Neolithic period. Recent archeological evidence points to the fact that rearing of bees was associated with beer and wine making. Hence honey was considered as an agent for fermentation rather than a mere sweetener.
To the modern times: The discovery of microbes and the science behind fermentation in the 18th and 19th centuries paved way to the modernization of the fermentation techniques. Fermentation can be achieved by the following methods depending on the source of microbes as
Spontaneous or Wild ferments: In this method, fermentation of the food is brought about by the microbes that are either naturally present in the food or the environment in which they are processed. Since the ancient times this type of fermentation has been in practice and still continues to be the practiced on a small-scale basis in many households. Here the prerequisites for the fermentation process are modified which includes the environmental conditions as well as the ingredients. The success rate of the spontaneous fermentation depends upon the ability of the friendly microbes in achieving an upper hand over the harmful ones in the given environment. In addition to this the presence of precise microbes as well as favorable conditions are also important. However, the production of fermented food with required qualities cannot be fully assured.
Spontaneous fermentation can be made more efficient by following a process called back-slopping. In this method a small quantity of food that has been satisfactorily fermented previously is added to a new batch of food that needs to be fermented. This method reduces the failure rate, fermentation time and also enhances the microbial type and quality. But the drawback with back-slopping is the challenges faced with regard to the correct microbial load needed for fermentation.
Spontaneous ferments examples: Sauerkraut, kimchi, some fermented soy products.
Back-slopping examples: Sourdough bread, Sauerkraut, kefir, beer, cheese, dry sausages.
Starter cultures: These are live preparations containing single or mixed microbes that are used in the fermentation of foods. Depending on the temperature that is needed for the growth of the culture, starters can be either mesophilic or thermophilic. Mesophilic grow at moderate temperatures (around 30 degrees C) whereas thermophilic grow at higher temperatures (around 42 degrees C). Starter cultures can also be classified on the basis of the microbial strain content and its potential for fermentation as
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